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  • Message-passing based algorithm for the global alignment of clustered pairwise PPI networks 

    Authors:Yenigün, Doğan Yiğit
    Publisher and Date:(Kadir Has University, 2013)
    Constrained global network alignments on pairwise protein-protein interaction (PPI) networks involve matchings between two organisms where proteins are grouped together in a great number of clusters, produced by algorithms that seek functionally ortholog ones and these organisms are represented as graphs. Unlike balanced global network alignments, this has not gained much popularity in bioinformatics. Only a few methods have been proposed thus far; by assuming specific structures of networks ...