Bilgisayar Mühendisliği Bölümü Koleksiyonu
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Conference Object Citation Count: 1Accelerating Brain Simulations on Graphical Processing Units(IEEE, 2015) Bozkuş, Zeki; El-Ghazawi, Tarek A.; Bozkuş, ZekiNEural Simulation Tool(NEST) is a large scale spiking neuronal network simulator of the brain. In this work we present a CUDA(R) implementation of NEST. We were able to gain a speedup of factor 20 for the computational parts of NEST execution using a different data structure than NEST's default. Our partial implementation shows the potential gains and limitations of such possible port. We discuss possible novel approaches to be able to adapt generic spiking neural network simulators such as NEST to run on commodity or high-end GPGPUs.Conference Object Citation Count: 4Action Recognition Using Random Forest Prediction with Combined Pose-based and Motion-based Features(IEEE, 2013) Ar, İlktan; Akgül, Yusuf SinanIn this paper we propose a novel human action recognition system that uses random forest prediction with statistically combined pose-based and motion-based features. Given a set of training and test image sequences (videos) we first adopt recent techniques that extract low-level features: motion and pose features. Motion-based features which represent motion patterns in the consecutive images are formed by 3D Haar-like features. Pose-based features are obtained by the calculation of scale invariant contour-based features. Then using statistical methods we combine these low-level features to a novel compact representation which describes the global motion and the global pose information in the whole image sequence. Finally Random Forest classification is employed to recognize actions in the test sequences by using this novel representation. Our experimental results on KTH and Weizmann datasets have shown that the combination of pose-based and motion-based features increased the system recognition accuracy. The proposed system also achieved classification rates comparable to the state-of-the-art approaches.Conference Object Citation Count: 2Active reconfigurable control of a submarine with indirect adaptive control(2003) Kerestecioğlu, Feza; Kerestecioğlu, FezaAn indirect adaptive controller is designed for submersibles. The design is developed using a linearized MIMO model of a submarine. Standard recursive least squares estimation method is used to estimate the parameters. Depth and pitch angle of the submarine is controlled by means of the well-known indirect self-tuning method. In case of a system fault estimated parameters of the submarine model have been used to update the controller coefficients.Conference Object Citation Count: 1An Analysis for the Use of Compressed Sensing Method in Microwave Imaging(IEEE, 2017) Çalışkan, Cafer; Tekbaş, Mustafa; Ünal, İlhami; Erdoğan, Sercan; Çalışkan, CaferOne of the most important problems encountered in microwave imaging methods is intensive data processing traffic that occurs when high resolution and real time tracking is desired. Radar signals can be recovered without loss of data with a randomly selected subset of the measurement data by compression sensing (CS) method which has been popular in recent years. For this reason, in this study, the use and capabilities of the CS method were investigated for tracking moving human, and the target information was correctly determined for the data obtained much below the Nyquist sampling criterion. In this study, it was revealed that the CS method can be developed for target detection and trackingConference Object Citation Count: 1An analysis for the use of compressed sensing method in microwave imaging [Mikrodalga Görüntülemede Sıkıştırılmış Algılama Yönteminin Kullanımına Yönelik Bir Analiz](Institute of Electrical and Electronics Engineers Inc., 2017) Çalışkan, Cafer; Tekbaş, Mustafa; Ünal, İlhami; Erdogan, Sercan; Çalışkan, CaferOne of the most important problems encountered in microwave imaging methods is intensive data processing traffic that occurs when high resolution and real time tracking is desired. Radar signals can be recovered without loss of data with a randomly selected subset of the measurement data by compression sensing (CS) method which has been popular in recent years. For this reason in this study the use and capabilities of the CS method were investigated for tracking moving human and the target information was correctly determined for the data obtained much below the Nyquist sampling criterion. In this study it was revealed that the CS method can be developed for target detection and tracking. © 2017 IEEE.Conference Object Citation Count: 1Analytical Expense Management System(IEEE, 2009) Arsan, Taner; Bozkuş, Zeki; Arsan, TanerAlthough the development of communication technologies (e.g: UMTS ADSL) allowed the elaboration of multiple users' web applications (e.g. information storage) there are still many improvements on many applications to be done and uncovered areas. Expense management systems on web application area are still in their infancy. Expense management software is widely spread in companies and most of time supported by their intranet. These solutions are quite simple as they mainly collect the information related to the expenses and may propose a simple aggregation of these figures. The result is close to what an excel sheet provides.Conference Object Citation Count: 1Ask me: A Question Answering System via Dynamic Memory Networks(Institute of Electrical and Electronics Engineers Inc., 2019) Yiğit, Gülsüm; Amasyalı, Mehmet FatihMost of the natural language processing problems can be reduced into a question answering problem. Dynamic Memory Networks (DMNs) are one of the solution approaches for question answering problems. Based on the analysis of a question answering system built by DMNs described in [1], this study proposes a model named DMN∗ which contains several improvements on its input and attention modules. DMN∗ architecture is distinguished by a multi-layer bidirectional LSTM (Long Short Term Memory) architecture on input module and several changes in computation of attention score in attention module. Experiments are conducted on Facebook bAbi dataset [2]. We also introduce Turkish bAbi dataset, and produce increased vocabulary sized tasks for each dataset. The experiments are performed on English and Turkish datasets and the accuracy performance results are compared by the work described in [1]. Our evaluation shows that the proposed model DMN∗ obtains improved accuracy performance results on various tasks for both Turkish and English.Conference Object Citation Count: 0Audience Tracking and Cheering Content Control in Sports Events(IEEE, 2020) Arsan, Taner; Dursun, Sefa; Kumas, Osman; Çakir, Nagehan; Arsan, TanerSwearing cheers encountered in sports competitions do not comply with sports ethics and morals. Even if this kind of cheering is a group, the entire tribune block is penalized in accordance with the current rules. This method is not preventive and individual punishment should be used. The aim of this study is to determine the individuals who cheer with swearing content. In this study, the person detection is made with the multi-task cascaded convolutional neural network. Moreover, facial landmarks representing the facial regions and the regions related to them are determined as a result of this process. The mouth region is also determined by means of these important points removed, and finally the mouth is determined according to the equation. The face recognition is carried out because the person would be in a state of yelling if the mouth opening ratio exceeds the threshold value by determining the rate of opening. Landmarks extracted from the facial regions for the face recognition are transformed into feature vectors by FaceNet, and the model is created by classifying these vectors with classifiers to use in recognition process. When evaluated in terms of industry, face recognition and detection systems find a wide field of study.Article Citation Count: 54BEAMS: backbone extraction and merge strategy for the global many-to-many alignment of multiple PPI networks(Oxford University Press, 2014) Erten, Cesim; Erten, CesimMotivation: Global many-to-many alignment of biological networks has been a central problem in comparative biological network studies. Given a set of biological interaction networks the informal goal is to group together related nodes. For the case of protein-protein interaction networks such groups are expected to form clusters of functionally orthologous proteins. Construction of such clusters for networks from different species may prove useful in determining evolutionary relationships in predicting the functions of proteins with unknown functions and in verifying those with estimated functions. Results: A central informal objective in constructing clusters of orthologous proteins is to guarantee that each cluster is composed of members with high homological similarity usually determined via sequence similarities and that the interactions of the proteins involved in the same cluster are conserved across the input networks. We provide a formal definition of the global many-to-many alignment of multiple protein-protein interaction networks that captures this informal objective. We show the computational intractability of the suggested definition. We provide a heuristic method based on backbone extraction and merge strategy (BEAMS) for the problem. We finally show through experiments based on biological significance tests that the proposed BEAMS algorithm performs better than the state-of-the-art approaches. Furthermore the computational burden of the BEAMS algorithm in terms of execution speed and memory requirements is more reasonable than the competing algorithms.Conference Object Citation Count: 7Big Data Platform Development with a Domain Specific Language for Telecom Industries(IEEE, 2013) Arsan, Taner; Bozkuş, Zeki; Bozkuş, Zeki; Arsan, TanerThis paper introduces a system that offer a special big data analysis platform with Domain Specific Language for telecom industries. This platform has three main parts that suggests a new kind of domain specific system for processing and visualization of large data files for telecom organizations. These parts are Domain Specific Language (DSL) Parallel Processing/Analyzing Platform for Big Data and an Integrated Result Viewer. hi addition to these main parts Distributed File Descriptor (DFD) is designed for passing information between these modules and organizing communication. To find out benefits of this domain specific solution standard framework of big data concept is examined carefully. Big data concept has special infrastructure and tools to perform for data storing processing analyzing operations. This infrastructure can be grouped as four different parts these are infrastructure programming models high performance schema free databases and processing-analyzing. Although there are lots of advantages of Big Data concept it is still very difficult to manage these systems for many enterprises. Therefore this study suggest a new higher level language called as DSL which helps enterprises to process big data without writing any complex low level traditional parallel processing codes a new kind of result viewer and this paper also presents a Big Data solution system that is called Petaminer.Article Citation Count: 0Büyük Patlama – Büyük Çöküş Optimizasyon Yöntemi Kullanılarak Bluetooth Tabanlı İç Mekan Konum Belirleme Sisteminin Doğruluğunun İyileştirilmesi(Süleyman Demirel Üniversitesi, 2018) Arsan, TanerDüşük enerjili Bluetooth işaretçi (Bluetooth low energy - BLE beacon) teknolojisi, iç mekan konum belirleme sistemlerinde başarılı ve düşük maliyetli çözümler sunan gelişmekte olan bir teknolojidir. Bu çalışmada, BLE işaretçileri (beacons) kullanan bir iç mekan konum belirleme sistemi geliştirilmiş, kullanılan ilave algoritmalarla standart sensörlerden elde edilen konum değerlerinin doğruluğunun artırılması amaçlanmıştır. Bunun için, deneysel iç mekan konum algılama sisteminden elde edilen konum bilgilerine Büyük Patlama – Büyük Çöküş (Big Bang – Big Crunch (BB-BC)) optimizasyon yöntemi uygulanmış ve konum doğruluğunun geliştirildiği yapılan testlerle kanıtlanmıştır. Test alanı olarak, 9,60 m × 3,90 m boyutundaki 37,44 m2'lik alan seçilmiş ve 2,40 m × 1,30 m boyutundaki oniki tane ızgara alanına ayak izi (fingerprinting) algoritması uygulanmıştır. Test alanına dört tane BLE işaretçi (beacon) yerleştirilmiş, on iki test alanından 150 saniye boyunca toplam 9.000 ölçüm yapılmıştır. Ölçüm sonuçları Büyük Patlama – Büyük Çöküş optimizasyon yöntemi ile Öklid uzaklık eşleştirme yöntemi ve Kalman Filtresi kullanılarak iyileştirilmiş, bu sayede konum doğruluğu %26,62'den %75,69'a arttırılmıştır.Article Citation Count: 0Büyük patlama büyük çöküş optimizasyon yöntemi ile ultra geniş band sensörlerinin iç mekân konum belirleme doğruluklarının iyileştirilmesi(Pamukkale Üniversitesi, 2018) Arsan, TanerUltra geniş band teknolojisi, birçok iç mekân konum belirleme sisteminde başarılı çözümler sunan, diğer yöntemlere kıyasla daha iyi performans gösteren, gelişmekte olan bir teknolojidir. Bu çalışmada, ultra geniş band (Ultra Wide Band-UWB) sensörler kullanılarak bir iç mekân konum belirleme sistemi geliştirilmiş ve kullanılan ek algoritmalarla, standart donanımların sağladığı doğruluk düzeyi arttırılırken aynı zamanda ortalama hatayı azaltmak hedeflenmiştir. Bu amaçla Büyük Patlama - Büyük Çöküş (Big Bang-Big Crunch veya BB-BC) optimizasyon yöntemi deneysel iç mekân konumlandırma sistemine uygulanmış ve ölçüm doğruluğu üzerindeki olumlu etkisi yapılan testlerle kanıtlanmıştır. Test alanı olarak 7.35 m × 5.41 m boyutlarında 39.76 m2 'lik bir alan seçilmiş ve özel olarak tasarlanmış bir tavan sistemine yerden 2.85 m yüksekliğe üç farklı UWB alıcı yerleştirilmiş ve 182 adet test noktasından 60 sn.süreyle toplam 10.920 ölçüm alınmıştır. Ölçüm sonuçları Büyük Patlama - Büyük Çöküş optimizasyon algoritması ile düzeltilerek, ortalama hatası önceki 20.72 cm değerinden 15.02 cm’ye düşürülmüş, böylelikle ölçüm sonuçlarının doğruluğu arttırılmıştır.Article Citation Count: 14CAMPways: constrained alignment framework for the comparative analysis of a pair of metabolic pathways(Oxford University Press, 2013) Erten, Cesim; Biyikoglu, Turker; Erten, CesimMotivation: Given a pair of metabolic pathways an alignment of the pathways corresponds to a mapping between similar substructures of the pair. Successful alignments may provide useful applications in phylogenetic tree reconstruction drug design and overall may enhance our understanding of cellular metabolism. Results: We consider the problem of providing one-to-many alignments of reactions in a pair of metabolic pathways. We first provide a constrained alignment framework applicable to the problem. We show that the constrained alignment problem even in a primitive setting is computationally intractable which justifies efforts for designing efficient heuristics. We present our Constrained Alignment of Metabolic Pathways (CAMPways) algorithm designed for this purpose. Through extensive experiments involving a large pathway database we demonstrate that when compared with a state-of-the-art alternative the CAMPways algorithm provides better alignment results on metabolic networks as far as measures based on same-pathway inclusion and biochemical significance are concerned. The execution speed of our algorithm constitutes yet another important improvement over alternative algorithms.Conference Object Citation Count: 1Channel estimation in underwater cooperative OFDM system with amplify-and-forward relaying(IEEE, 2012) Şenol, Habib; Panayırcı, Erdal; Erdoğan, Mustafa; Uysal, MuratThis paper is concerned with a challenging problem of channel estimation for amplify-and-forward cooperative relay based orthogonal frequency division multiplexing (OFDM) systems in the presence of sparse underwater acoustic channels and of the correlative non-Gaussian noise. We exploit the sparse structure of the channel impulse response to improve the performance of the channel estimation algorithm due to the reduced number of taps to be estimated. The resulting novel algorithm initially estimates the overall sparse channel taps from the source to the destination as well as their locations using the matching pursuit (MP) approach. The correlated non-Gaussian effective noise is modeled as a Gaussian mixture. Based on the Gaussian mixture model an efficient and low complexity algorithm is developed based on the combinations of the MP and the space-alternating generalized expectation-maximization (SAGE) technique to improve the estimates of the channel taps and their location as well as the noise distribution parameters in an iterative way. The proposed SAGE algorithm is designed in such a way that by choosing the admissible hidden data properly on which the SAGE algorithm relies a subset of parameters is updated for analytical tractability and the remaining parameters for faster convergence Computer simulations show that underwater acoustic (UWA) channel is estimated very effectively and the proposed algorithm has excellent symbol error rate and channel estimation performance.Article Citation Count: 10A Clustering-Based Approach for Improving the Accuracy of UWB Sensor-Based Indoor Positioning System(Hindawi LTD, 2019) Arsan, Taner; Hameez, Mohammed Muwafaq NooriThere are several methods which can be used to locate an object or people in an indoor location. Ultra-wideband (UWB) is a specifically promising indoor positioning technology because of its high accuracy, resistance to interference, and better penetration. This study aims to improve the accuracy of the UWB sensor-based indoor positioning system. To achieve that, the proposed system is trained by using the K-means algorithm with an additional average silhouette method. This helps us to define the optimal number of clusters to be used by the K-means algorithm based on the value of the silhouette coefficient. Fuzzy c-means and mean shift algorithms are added for comparison purposes. This paper also introduces the impact of the Kalman filter while using the measured UWB test points as an input for the Kalman filter in order to obtain a better estimation of the position. As a result, the average localization error is reduced by 43.26% (from 16.3442 cm to 9.2745 cm) when combining the K-means algorithm with the Kalman filter in which the Kalman-filtered UWB-measured test points are used as an input for the proposed system.Conference Object Citation Count: 1Connected navigation of non-communicating mobile agents(IEEE, 2012) Kerestecioğlu, Feza; Cezayirli, AhmetThis article discusses the connectivity of autonomous mobile robots that do not have communication capabilities. We show that if the group members follow the proposed Local Steering Strategy which utilizes information only about the relative positions of neighbor robots they can sustain their connectivity even in the case of bounded position measurement errors and the occultation of robots by other robots in the group. To reduce the computational burden in the implementation of the proposed methodology we used sub-optimal solutions. © 2012 IEEE.Conference Object Citation Count: 1Dark Patches in Clustering(IEEE, 2017) Büyükkaya, Eliya; Büyükkaya, EliyaThis survey highlights issues in clustering which hinder in achieving optimal solution or generates inconsistent outputs. We called such malignancies as dark patches. We focus on the issues relating to clustering rather than concepts and techniques of clustering. For better insight into the issues of clustering we categorize dark patches into three classes and then compare various clustering methods to analyze distributed datasets with respect to classes of dark patches rather than conventional way of comparison by performance and accuracy criteria because performance and accuracy may provide misleading conclusions due to lack of labeled data in unsupervised learning. To the best of our knowledge this prime feature makes our survey paper unique from other clustering survey papers.Conference Object Citation Count: 1Data-Aided Autoregressive Sparse Channel Tracking for OFDM Systems(IEEE, 2016) Şenol, Habib; Erküçük, Serhat; Erküçük, Serhat; Cirpan, Hakan AliIn order to meet future communication system requirements channel estimation over fast fading and frequency selective channels is crucial. In this paper Space Alternated Generalized Expectation Maximization Maximum a Posteriori (SAGE-MAP) based channel estimation algorithm is proposed for Orthogonal Frequency Division Multiplexing (OFDM) systems for Autoregressive (AR) modeled time-varying sparse channels. Also an initialization algorithm has been developed from the widely used sparse approximation algorithm Orthogonal Matching Pursuit (OMP) since the performance of SAGE algorithm strictly depends on initialization. The results show that multipath delay positions can be tracked successfully for every time instant using the proposed SAGE-MAP based approach.Conference Object Citation Count: 1Distributed estimation over parallel fading channels with channel estimation error(IEEE, 2008) Şenol, Habib; Tepedelenlioğlu, CihanWe consider distributed estimation of a source observed by sensors in additive Gaussian noise where the sensors are connected to a fusion center with unknown orthogonal (parallel) flat Rayleigh fading channels. We adopt a two-phase approach of (i) channel estimation with training and (ii) source estimation given the channel estimates where the total power is fixed. We prove that allocating half the total power into training is optimal and show that compared to the perfect channel case a performance loss of at least 6 dB is incurred. In addition we show that unlike the perfect channel case increasing the number of sensors will lead to an eventual degradation in performance. We characterize the optimum number of sensors as a function of the total power and noise statistics. Simulations corroborate our analytical findings.Conference Object Citation Count: 1Distributed estimation with channel estimation error over orthogonal fading channels(IEEE, 2007) Şenol, Habib; Tepedelenlioğlu, CihanWe study distributed estimation of a source corrupted by an additive Gaussian noise and observed by sensors which are connected to a fusion center with unknown orthogonal (parallel) flat Rayleigh fading channels. The fading communication channels are estimated with training. Subsequently source estimation given the channel estimates and transmitted sensor observations is performed. We consider a setting where the estimated channels are fed-back to the sensors for optimal power allocation which leads to a threshold behavior of sensors with bad channels being unused (inactive). We also show that at least half of the total power should be used for training. Simulation results corroborate our analytical findings.