Reliability-Oriented Bioinformatic Networks Visualization

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Date

2011

Authors

Aladağ, Ahmet Emre
Erten, Cesim
Sözdinler, Melih

Journal Title

Journal ISSN

Volume Title

Publisher

Oxford University Press

Open Access Color

GOLD

Green Open Access

Yes

OpenAIRE Downloads

0

OpenAIRE Views

4

Publicly Funded

No
Impulse
Average
Influence
Average
Popularity
Average

Research Projects

Journal Issue

Abstract

We present our protein-protein interaction (PPI) network visualization system RobinViz (reliability-oriented bioinformatic networks visualization). Clustering the PPI network based on gene ontology (GO) annotations or biclustered gene expression data providing a clustered visualization model based on a central/peripheral duality computing layouts with algorithms specialized for interaction reliabilities represented as weights completely automated data acquisition processing are notable features of the system.

Description

Keywords

N/A, Protein Interaction Mapping, Computer Graphics, Cluster Analysis, Algorithms, Software

Turkish CoHE Thesis Center URL

Fields of Science

0301 basic medicine, 03 medical and health sciences, 0206 medical engineering, 02 engineering and technology

Citation

WoS Q

Q1

Scopus Q

Q1
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OpenCitations Citation Count
1

Source

Bioinformatics

Volume

27

Issue

11

Start Page

1583

End Page

1584
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Citations

CrossRef : 1

Scopus : 0

PubMed : 1

Captures

Mendeley Readers : 22

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